Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Gm8342-201ENSMUST00000209839 757 ntBASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Gm5996-201ENSMUST00000211110 718 ntBASIC12.29□□□□□ -0.44
Chmp6P0C0A3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Gm8420-201ENSMUST00000097103 598 ntBASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Gm20495-201ENSMUST00000173902 235 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Gm7741-201ENSMUST00000181445 989 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Gm8574-201ENSMUST00000203207 924 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp6P0C0A3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chmp6P0C0A3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm14263-201ENSMUST00000117955 746 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12616-201ENSMUST00000118594 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm9550-201ENSMUST00000161130 862 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm19459-201ENSMUST00000176240 835 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12624-201ENSMUST00000177615 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12621-201ENSMUST00000177760 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12615-201ENSMUST00000177970 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12622-201ENSMUST00000177975 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12627-201ENSMUST00000178412 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12625-201ENSMUST00000179122 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12614-201ENSMUST00000179586 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm12613-201ENSMUST00000180323 382 ntBASIC12.27□□□□□ -0.45
Chmp6P0C0A3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.27□□□□□ -0.45
Chmp6P0C0A3 Gm37981-201ENSMUST00000194280 535 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms