Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.96
Hoxd3P09027 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Hoxd3P09027 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm42942-201ENSMUST00000196086 1328 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm8731-201ENSMUST00000118088 412 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm15573-201ENSMUST00000119487 540 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm7666-201ENSMUST00000146631 819 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm22144-201ENSMUST00000157402 102 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm3715-201ENSMUST00000172308 617 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm19459-201ENSMUST00000176240 835 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm21943-201ENSMUST00000178181 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm28937-201ENSMUST00000185413 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm29400-201ENSMUST00000187208 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm28662-201ENSMUST00000188446 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm28251-201ENSMUST00000188835 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm37318-201ENSMUST00000194325 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm38017-201ENSMUST00000194768 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm37287-201ENSMUST00000195449 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm37793-201ENSMUST00000195548 695 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm43774-201ENSMUST00000196327 878 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm18985-201ENSMUST00000196472 1079 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm42640-201ENSMUST00000199792 1195 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm21461-201ENSMUST00000200382 863 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Hoxd3P09027 AC147101.1-201ENSMUST00000217964 312 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.08□□□□□ -0.96
Hoxd3P09027 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hoxd3P09027 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxd3P09027 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms