Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd3B1AR17 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm11801-201ENSMUST00000117807 746 ntBASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm29067-201ENSMUST00000190821 470 ntBASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.04□□□□□ -0.64
Chd3B1AR17 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.04□□□□□ -0.64
Chd3B1AR17 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm12274-201ENSMUST00000120062 385 ntBASIC11.04□□□□□ -0.64
Chd3B1AR17 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.04□□□□□ -0.64
Chd3B1AR17 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.04□□□□□ -0.64
Chd3B1AR17 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chd3B1AR17 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd3B1AR17 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Snord17-201ENSMUST00000104526 238 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm14592-201ENSMUST00000117201 560 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm17070-201ENSMUST00000170463 784 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm5621-201ENSMUST00000187303 640 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chd3B1AR17 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.03□□□□□ -0.64
Chd3B1AR17 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd3B1AR17 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chd3B1AR17 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd3B1AR17 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm13422-201ENSMUST00000118834 504 ntBASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.02□□□□□ -0.64
Chd3B1AR17 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm28833-201ENSMUST00000189671 559 ntBASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.02□□□□□ -0.64
Chd3B1AR17 Gm44814-201ENSMUST00000207018 434 ntBASIC11.02□□□□□ -0.64
Chd3B1AR17 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.02□□□□□ -0.64
Chd3B1AR17 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Chd3B1AR17 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms