Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm13492-201ENSMUST00000119772 665 ntBASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm8876-201ENSMUST00000120768 1122 ntBASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm27397-201ENSMUST00000184997 107 ntBASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm18187-201ENSMUST00000196476 984 ntBASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Gm4454-201ENSMUST00000190585 2578 ntBASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco4Q9JIS3 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gm11637-201ENSMUST00000120601 592 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gm15429-201ENSMUST00000151268 798 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gm37301-201ENSMUST00000195412 568 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 AC159896.2-201ENSMUST00000214753 269 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 AC167013.1-201ENSMUST00000228592 202 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco4Q9JIS3 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Smco4Q9JIS3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms