Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Snora73b-201ENSMUST00000083419 205 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdc40Q9DC48 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cdc40Q9DC48 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm8194-201ENSMUST00000159783 859 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm25072-201ENSMUST00000175233 235 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm9358-201ENSMUST00000183067 927 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm17877-201ENSMUST00000192578 814 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm44980-201ENSMUST00000205826 314 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm6867-201ENSMUST00000219165 425 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdc40Q9DC48 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Gm11451-201ENSMUST00000118946 630 ntBASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Gm10807-201ENSMUST00000177134 795 ntBASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.51□□□□□ -0.73
Cdc40Q9DC48 Gm12407-201ENSMUST00000180219 324 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms