Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm25562-201ENSMUST00000104608 133 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Olfml3-204ENSMUST00000169286 874 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm26272-201ENSMUST00000179241 132 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm9162-201ENSMUST00000182081 991 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm37852-201ENSMUST00000193027 350 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gm9487-201ENSMUST00000216600 472 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rrp8Q9DB85 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Rrp8Q9DB85 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Gm25148-201ENSMUST00000104611 123 ntBASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Gm9372-201ENSMUST00000168454 430 ntBASIC11.08□□□□□ -0.64
Rrp8Q9DB85 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Trav11n-201ENSMUST00000200113 343 ntBASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.08□□□□□ -0.64
Rrp8Q9DB85 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Gm4903-201ENSMUST00000210462 405 ntBASIC11.08□□□□□ -0.64
Rrp8Q9DB85 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms