Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Gm24809-201ENSMUST00000175318 271 ntBASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Gm37365-201ENSMUST00000193109 409 ntBASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Gm44216-201ENSMUST00000203942 157 ntBASIC13.47□□□□□ -0.25
Stag1Q9D3E6 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Gm8255-201ENSMUST00000218693 305 ntBASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Gm8420-201ENSMUST00000097103 598 ntBASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Stag1Q9D3E6 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm22846-201ENSMUST00000157706 270 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm44647-201ENSMUST00000207402 428 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm9102-201ENSMUST00000219250 465 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Gm25580-201ENSMUST00000083409 327 ntBASIC13.46□□□□□ -0.25
Stag1Q9D3E6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Stag1Q9D3E6 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Gm4862-201ENSMUST00000170405 438 ntBASIC13.45□□□□□ -0.26
Stag1Q9D3E6 Gm26976-201ENSMUST00000182929 908 ntBASIC13.45□□□□□ -0.26
Stag1Q9D3E6 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms