Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Mir8109-201ENSMUST00000184375 117 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm28937-201ENSMUST00000185413 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm29400-201ENSMUST00000187208 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm28662-201ENSMUST00000188446 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm28251-201ENSMUST00000188835 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm37489-201ENSMUST00000191883 159 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm37318-201ENSMUST00000194325 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm38017-201ENSMUST00000194768 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm37287-201ENSMUST00000195449 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm37793-201ENSMUST00000195548 695 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm10608-202ENSMUST00000213924 676 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm2553-201ENSMUST00000215986 605 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 AC106830.1-201ENSMUST00000228032 1003 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim13Q9CYB0 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm6963-201ENSMUST00000147879 379 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm3096-201ENSMUST00000185770 364 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm6450-201ENSMUST00000200896 574 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim13Q9CYB0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim13Q9CYB0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trim13Q9CYB0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms