Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim34aQ99PP6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Gm11952-201ENSMUST00000121172 821 ntBASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Gm26119-201ENSMUST00000175601 104 ntBASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim34aQ99PP6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm22937-201ENSMUST00000103954 131 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm12986-201ENSMUST00000119037 967 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm13981-201ENSMUST00000122360 447 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm31274-201ENSMUST00000197356 229 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm43002-201ENSMUST00000200310 155 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm43249-201ENSMUST00000200464 458 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm6855-201ENSMUST00000206307 790 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim34aQ99PP6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim34aQ99PP6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim34aQ99PP6 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim34aQ99PP6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms