Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm24679-201ENSMUST00000158762 111 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm3329-201ENSMUST00000159873 556 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm7593-201ENSMUST00000187246 644 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm28833-201ENSMUST00000189671 559 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm29067-201ENSMUST00000190821 470 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm25053-202ENSMUST00000199731 132 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm43671-201ENSMUST00000200422 433 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm7082-201ENSMUST00000209880 969 ntBASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3b1Q99NB9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm9915-201ENSMUST00000066196 1383 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm28424-201ENSMUST00000187393 1319 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm13351-201ENSMUST00000118087 414 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Olfml3-204ENSMUST00000169286 874 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm37638-201ENSMUST00000194337 1123 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm44323-201ENSMUST00000198689 129 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm43966-201ENSMUST00000203301 612 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 n-R5s185-201ENSMUST00000083953 119 ntBASIC12□□□□□ -0.49
Sf3b1Q99NB9 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3b1Q99NB9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Gm25148-201ENSMUST00000104611 123 ntBASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Gm12218-201ENSMUST00000117666 399 ntBASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Gm12791-201ENSMUST00000120788 655 ntBASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Gm5599-201ENSMUST00000209602 788 ntBASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sf3b1Q99NB9 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms