Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm23085-201ENSMUST00000157849 293 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Olfml3-204ENSMUST00000169286 874 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm18734-201ENSMUST00000172937 808 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm18730-201ENSMUST00000218038 343 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm29499-201ENSMUST00000189151 486 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm28329-201ENSMUST00000191208 689 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm29171-201ENSMUST00000191397 486 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm8342-201ENSMUST00000209839 757 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm6082-201ENSMUST00000215204 454 ntBASIC11.67□□□□□ -0.54
Trim60Q8VI40 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim60Q8VI40 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trim60Q8VI40 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm24074-201ENSMUST00000158178 260 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm17376-201ENSMUST00000166016 84 ntBASIC11.66□□□□□ -0.54
Trim60Q8VI40 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim60Q8VI40 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms