Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.67□□□□□ -0.54
Rprd1aQ8VDS4 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm37905-201ENSMUST00000195310 341 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm37826-201ENSMUST00000195329 322 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm18165-201ENSMUST00000217426 928 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm5468-202ENSMUST00000227851 682 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gm10254-201ENSMUST00000052888 867 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rprd1aQ8VDS4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Gm16219-201ENSMUST00000120096 274 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Gm1848-201ENSMUST00000120711 789 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Gm25492-201ENSMUST00000157383 129 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Olfml3-204ENSMUST00000169286 874 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Gm8285-201ENSMUST00000208293 759 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rprd1aQ8VDS4 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms