Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm14193-201ENSMUST00000105067 153 ntBASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm15595-201ENSMUST00000120840 961 ntBASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm14277-201ENSMUST00000121195 360 ntBASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm15329-201ENSMUST00000121408 155 ntBASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cchcr1Q8K2I2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cchcr1Q8K2I2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Gm8752-201ENSMUST00000173427 1694 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cchcr1Q8K2I2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms