Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Brf1Q8CFK2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm13422-201ENSMUST00000118834 504 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm14942-201ENSMUST00000119642 336 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm11246-201ENSMUST00000120880 345 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm19246-201ENSMUST00000173599 255 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm23771-201ENSMUST00000178702 110 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm45770-201ENSMUST00000212105 616 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Brf1Q8CFK2 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Gm27910-201ENSMUST00000185004 107 ntBASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Gm43520-201ENSMUST00000197996 164 ntBASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.59□□□□□ -0.23
Brf1Q8CFK2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Brf1Q8CFK2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms