Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm7851-201ENSMUST00000117574 323 ntBASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm12247-201ENSMUST00000117585 670 ntBASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm15808-201ENSMUST00000119046 604 ntBASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Olfml3-204ENSMUST00000169286 874 ntBASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm9353-201ENSMUST00000200472 604 ntBASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gm25148-201ENSMUST00000104611 123 ntBASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gm15617-201ENSMUST00000118973 771 ntBASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gm12407-201ENSMUST00000180219 324 ntBASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Ccdc38Q8CDN8 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc38Q8CDN8 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC12.58□□□□□ -0.39
Ccdc38Q8CDN8 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc38Q8CDN8 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc38Q8CDN8 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm8036-201ENSMUST00000118089 1718 ntBASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm11450-201ENSMUST00000121144 333 ntBASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm24844-201ENSMUST00000158679 127 ntBASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm42867-201ENSMUST00000202995 469 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms