Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm43184-201ENSMUST00000197247 542 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm44008-201ENSMUST00000204345 412 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm18539-201ENSMUST00000204745 1090 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 AC141438.2-201ENSMUST00000215068 271 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm12176-201ENSMUST00000121420 875 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm7940-201ENSMUST00000218195 769 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc87Q8CDL9 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms