Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr7Q8BU04 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm4917-201ENSMUST00000121452 650 ntBASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm3828-201ENSMUST00000121817 257 ntBASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.41□□□□□ -0.58
Ubr7Q8BU04 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubr7Q8BU04 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm12463-201ENSMUST00000118271 849 ntBASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.4□□□□□ -0.58
Ubr7Q8BU04 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm7525-201ENSMUST00000219425 454 ntBASIC11.4□□□□□ -0.58
Ubr7Q8BU04 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr7Q8BU04 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms