Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm13117-201ENSMUST00000120894 691 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm12628-201ENSMUST00000122193 382 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm20495-201ENSMUST00000173902 235 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Mir6407-201ENSMUST00000184510 101 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm5100-201ENSMUST00000195631 589 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm45120-201ENSMUST00000208880 408 ntBASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh8Q7TSK3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm38314-201ENSMUST00000195709 625 ntBASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm42816-201ENSMUST00000198433 325 ntBASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh8Q7TSK3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms