Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm22379-201ENSMUST00000157480 131 ntBASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Mir6958-201ENSMUST00000184207 73 ntBASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ubfd1Q78JW9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm11628-201ENSMUST00000117568 171 ntBASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm9673-201ENSMUST00000119287 781 ntBASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubfd1Q78JW9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms