Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Gm26448-201ENSMUST00000082446 203 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm22846-201ENSMUST00000157706 270 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm8459-201ENSMUST00000162504 760 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm25700-201ENSMUST00000177693 110 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 AA914427-201ENSMUST00000193194 1166 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm5714-201ENSMUST00000197343 566 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm42867-201ENSMUST00000202995 469 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm6867-201ENSMUST00000219165 425 ntBASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Scaf4Q6PFF0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gm12957-201ENSMUST00000117835 377 ntBASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gm37301-201ENSMUST00000195412 568 ntBASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gm45856-201ENSMUST00000212752 416 ntBASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gm270-201ENSMUST00000223010 976 ntBASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Scaf4Q6PFF0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scaf4Q6PFF0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Scaf4Q6PFF0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Scaf4Q6PFF0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms