Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm11663-201ENSMUST00000117888 290 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm26083-201ENSMUST00000157904 193 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm25890-201ENSMUST00000177643 165 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm22614-201ENSMUST00000178300 165 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm3332-201ENSMUST00000189337 928 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm45433-201ENSMUST00000209386 247 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm4978-201ENSMUST00000071565 801 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm22042-201ENSMUST00000082989 165 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm26110-201ENSMUST00000083971 165 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm8815-201ENSMUST00000173809 620 ntBASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm20495-201ENSMUST00000173902 235 ntBASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Smarcd3Q6P9Z1 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms