Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Casc4Q6P2L7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Casc4Q6P2L7 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 BC043934-202ENSMUST00000185694 2356 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm11949-201ENSMUST00000117640 372 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm15549-201ENSMUST00000121595 622 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm43947-201ENSMUST00000203019 959 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm44008-201ENSMUST00000204345 412 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm17825-201ENSMUST00000206836 794 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm10254-201ENSMUST00000052888 867 ntBASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Casc4Q6P2L7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Gm22902-201ENSMUST00000158488 302 ntBASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Gm3329-201ENSMUST00000159873 556 ntBASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Gm9550-201ENSMUST00000161130 862 ntBASIC11.44□□□□□ -0.58
Casc4Q6P2L7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.44□□□□□ -0.58
Casc4Q6P2L7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms