Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.87□□□□□ -0.67
ClpbQ60649 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm43966-201ENSMUST00000203301 612 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.87□□□□□ -0.67
ClpbQ60649 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.87□□□□□ -0.67
ClpbQ60649 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.87□□□□□ -0.67
ClpbQ60649 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
ClpbQ60649 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm24844-201ENSMUST00000158679 127 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 Gm17391-201ENSMUST00000171036 126 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm45398-201ENSMUST00000210561 165 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.86□□□□□ -0.67
ClpbQ60649 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
ClpbQ60649 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.86□□□□□ -0.67
ClpbQ60649 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.86□□□□□ -0.67
ClpbQ60649 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ClpbQ60649 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.85□□□□□ -0.67
ClpbQ60649 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ClpbQ60649 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ClpbQ60649 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms