Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav5d-4Q5R1F6 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm14193-201ENSMUST00000105067 153 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm15617-201ENSMUST00000118973 771 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm15549-201ENSMUST00000121595 622 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Olfml3-204ENSMUST00000169286 874 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm25732-201ENSMUST00000175168 60 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm45856-201ENSMUST00000212752 416 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gm19208-201ENSMUST00000213861 912 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav5d-4Q5R1F6 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms