Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm12164-201ENSMUST00000121695 551 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm17931-201ENSMUST00000208132 634 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.97□□□□□ -0.81
Sec61a1P61620 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.97□□□□□ -0.81
Sec61a1P61620 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm12266-201ENSMUST00000120311 962 ntBASIC9.97□□□□□ -0.81
Sec61a1P61620 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm4607-201ENSMUST00000206649 577 ntBASIC9.97□□□□□ -0.81
Sec61a1P61620 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.97□□□□□ -0.81
Sec61a1P61620 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sec61a1P61620 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Sec61a1P61620 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.96□□□□□ -0.81
Sec61a1P61620 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
Sec61a1P61620 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.96□□□□□ -0.81
Sec61a1P61620 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms