Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Nup43P59235 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nup43P59235 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nup43P59235 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Nup43P59235 Gm16071-201ENSMUST00000119589 793 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm12849-201ENSMUST00000120013 739 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm14395-201ENSMUST00000120494 563 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm22119-201ENSMUST00000175594 99 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm19459-201ENSMUST00000176240 835 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm23771-201ENSMUST00000178702 110 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm21778-201ENSMUST00000178779 471 ntBASIC10.67□□□□□ -0.7
Nup43P59235 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Gm17826-201ENSMUST00000189720 798 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm37826-201ENSMUST00000195329 322 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm42867-201ENSMUST00000202995 469 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.67□□□□□ -0.7
Nup43P59235 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.67□□□□□ -0.7
Nup43P59235 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.67□□□□□ -0.7
Nup43P59235 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.67□□□□□ -0.7
Nup43P59235 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nup43P59235 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.67□□□□□ -0.7
Nup43P59235 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Nup43P59235 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.67□□□□□ -0.7
Nup43P59235 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nup43P59235 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Gm9519-201ENSMUST00000206108 1337 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.66□□□□□ -0.7
Nup43P59235 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Gm15131-201ENSMUST00000119124 595 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.66□□□□□ -0.7
Nup43P59235 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Gm10731-201ENSMUST00000181171 448 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.66□□□□□ -0.7
Nup43P59235 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
Nup43P59235 Gm37458-201ENSMUST00000194055 410 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Gm37905-201ENSMUST00000195310 341 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms