Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rrp1P56183 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.73□□□□□ -0.37
Rrp1P56183 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rrp1P56183 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.72□□□□□ -0.37
Rrp1P56183 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.72□□□□□ -0.37
Rrp1P56183 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Mir1896-201ENSMUST00000122641 81 ntBASIC12.72□□□□□ -0.37
Rrp1P56183 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.72□□□□□ -0.37
Rrp1P56183 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Rrp1P56183 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Gm18734-201ENSMUST00000172937 808 ntBASIC12.72□□□□□ -0.37
Rrp1P56183 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rrp1P56183 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Gm37597-201ENSMUST00000191853 382 ntBASIC12.72□□□□□ -0.37
Rrp1P56183 Gm6108-201ENSMUST00000208365 367 ntBASIC12.72□□□□□ -0.37
Rrp1P56183 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rrp1P56183 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.72□□□□□ -0.37
Rrp1P56183 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rrp1P56183 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rrp1P56183 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rrp1P56183 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rrp1P56183 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rrp1P56183 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rrp1P56183 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Rrp1P56183 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rrp1P56183 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rrp1P56183 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.71□□□□□ -0.37
Rrp1P56183 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Snord17-201ENSMUST00000104526 238 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rrp1P56183 Gm14017-201ENSMUST00000121934 386 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rrp1P56183 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 Gm44262-201ENSMUST00000204969 372 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 Gm18212-201ENSMUST00000211678 889 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rrp1P56183 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rrp1P56183 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.71□□□□□ -0.37
Rrp1P56183 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
Rrp1P56183 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rrp1P56183 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rrp1P56183 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.7□□□□□ -0.38
Rrp1P56183 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rrp1P56183 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rrp1P56183 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms