Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pdx1P52946 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pdx1P52946 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
Pdx1P52946 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Pdx1P52946 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pdx1P52946 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Gm16219-201ENSMUST00000120096 274 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.15□□□□□ -0.62
Pdx1P52946 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.15□□□□□ -0.62
Pdx1P52946 Gm22846-201ENSMUST00000157706 270 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Gm37986-201ENSMUST00000193285 383 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Gm6439-201ENSMUST00000199849 862 ntBASIC11.15□□□□□ -0.62
Pdx1P52946 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Pdx1P52946 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pdx1P52946 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pdx1P52946 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Pdx1P52946 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pdx1P52946 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pdx1P52946 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pdx1P52946 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pdx1P52946 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.14□□□□□ -0.63
Pdx1P52946 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Pdx1P52946 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.14□□□□□ -0.63
Pdx1P52946 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pdx1P52946 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Gm14942-201ENSMUST00000119642 336 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.14□□□□□ -0.63
Pdx1P52946 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Gm23771-201ENSMUST00000178702 110 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms