Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Lhx3P50481 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lhx3P50481 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.42□□□□□ -0.58
Lhx3P50481 Gm25343-201ENSMUST00000157460 107 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.42□□□□□ -0.58
Lhx3P50481 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Gm9358-201ENSMUST00000183067 927 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Gm9369-201ENSMUST00000196009 733 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Gm42518-201ENSMUST00000196277 938 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.42□□□□□ -0.58
Lhx3P50481 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lhx3P50481 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.42□□□□□ -0.58
Lhx3P50481 Gm10752-201ENSMUST00000218348 729 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lhx3P50481 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.42□□□□□ -0.58
Lhx3P50481 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.42□□□□□ -0.58
Lhx3P50481 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.42□□□□□ -0.58
Lhx3P50481 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx3P50481 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lhx3P50481 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lhx3P50481 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.41□□□□□ -0.58
Lhx3P50481 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.41□□□□□ -0.58
Lhx3P50481 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm14592-201ENSMUST00000117201 560 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm12274-201ENSMUST00000120062 385 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.41□□□□□ -0.58
Lhx3P50481 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.41□□□□□ -0.58
Lhx3P50481 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Lhx3P50481 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 Gm29410-201ENSMUST00000188383 694 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 Id2-203ENSMUST00000222667 958 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms