Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Gm25881-201ENSMUST00000157783 103 ntBASIC10.22□□□□□ -0.77
Rfx3P48381 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.22□□□□□ -0.77
Rfx3P48381 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.22□□□□□ -0.77
Rfx3P48381 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Rfx3P48381 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.22□□□□□ -0.77
Rfx3P48381 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.22□□□□□ -0.77
Rfx3P48381 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rfx3P48381 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.22□□□□□ -0.77
Rfx3P48381 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Rfx3P48381 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.21□□□□□ -0.77
Rfx3P48381 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Rfx3P48381 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.21□□□□□ -0.77
Rfx3P48381 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Rfx3P48381 Gm14724-201ENSMUST00000118400 537 ntBASIC10.21□□□□□ -0.77
Rfx3P48381 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Gm8566-201ENSMUST00000120174 465 ntBASIC10.21□□□□□ -0.77
Rfx3P48381 Gm12997-201ENSMUST00000120207 640 ntBASIC10.21□□□□□ -0.77
Rfx3P48381 Gm12196-201ENSMUST00000120954 262 ntBASIC10.21□□□□□ -0.77
Rfx3P48381 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.21□□□□□ -0.77
Rfx3P48381 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Rfx3P48381 Gm8815-201ENSMUST00000173809 620 ntBASIC10.21□□□□□ -0.77
Rfx3P48381 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.21□□□□□ -0.77
Rfx3P48381 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Rfx3P48381 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.21□□□□□ -0.77
Rfx3P48381 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.21□□□□□ -0.77
Rfx3P48381 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.21□□□□□ -0.77
Rfx3P48381 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rfx3P48381 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Rfx3P48381 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Rfx3P48381 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Rfx3P48381 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.21□□□□□ -0.78
Rfx3P48381 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Rfx3P48381 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Rfx3P48381 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Rfx3P48381 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rfx3P48381 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.2□□□□□ -0.78
Rfx3P48381 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.2□□□□□ -0.78
Rfx3P48381 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.2□□□□□ -0.78
Rfx3P48381 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Rfx3P48381 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms