Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
VhlP40338 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
VhlP40338 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.28□□□□□ -0.92
VhlP40338 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VhlP40338 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
VhlP40338 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.27□□□□□ -0.92
VhlP40338 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.92
VhlP40338 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VhlP40338 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
VhlP40338 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
VhlP40338 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
VhlP40338 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
VhlP40338 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Gm15198-201ENSMUST00000117283 177 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm12241-201ENSMUST00000118330 726 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm11783-201ENSMUST00000119549 885 ntBASIC9.27□□□□□ -0.93
VhlP40338 Mir1896-201ENSMUST00000122641 81 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.27□□□□□ -0.93
VhlP40338 Gm24074-201ENSMUST00000158178 260 ntBASIC9.27□□□□□ -0.93
VhlP40338 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.27□□□□□ -0.93
VhlP40338 Gm20495-201ENSMUST00000173902 235 ntBASIC9.27□□□□□ -0.93
VhlP40338 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.27□□□□□ -0.93
VhlP40338 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm27501-201ENSMUST00000183599 107 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm27516-201ENSMUST00000184237 98 ntBASIC9.27□□□□□ -0.93
VhlP40338 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm38266-201ENSMUST00000194931 421 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.27□□□□□ -0.93
VhlP40338 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.27□□□□□ -0.93
VhlP40338 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm9797-202ENSMUST00000218003 294 ntBASIC9.27□□□□□ -0.93
VhlP40338 Gm9368-201ENSMUST00000219348 831 ntBASIC9.27□□□□□ -0.93
VhlP40338 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.27□□□□□ -0.93
VhlP40338 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
VhlP40338 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
VhlP40338 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
VhlP40338 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.27□□□□□ -0.93
VhlP40338 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
VhlP40338 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.27□□□□□ -0.93
VhlP40338 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VhlP40338 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.26□□□□□ -0.93
VhlP40338 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms