Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chd1P40201 Gm6141-201ENSMUST00000117181 695 ntBASIC16.54■□□□□ 0.24
Chd1P40201 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC16.54■□□□□ 0.24
Chd1P40201 Gm24368-201ENSMUST00000175388 106 ntBASIC16.54■□□□□ 0.24
Chd1P40201 Gm5259-201ENSMUST00000191231 800 ntBASIC16.54■□□□□ 0.24
Chd1P40201 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC16.54■□□□□ 0.24
Chd1P40201 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chd1P40201 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chd1P40201 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chd1P40201 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chd1P40201 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Gm37145-201ENSMUST00000193540 2756 ntBASIC16.54■□□□□ 0.24
Chd1P40201 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd1P40201 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd1P40201 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd1P40201 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Gm42467-201ENSMUST00000202954 1447 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chd1P40201 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd1P40201 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd1P40201 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd1P40201 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chd1P40201 Gm26356-201ENSMUST00000158217 283 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Gm3687-201ENSMUST00000161710 460 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chd1P40201 Gm38004-201ENSMUST00000192972 357 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Gm44139-201ENSMUST00000204903 373 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC16.53■□□□□ 0.24
Chd1P40201 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd1P40201 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
Chd1P40201 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC16.53■□□□□ 0.24
Chd1P40201 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chd1P40201 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd1P40201 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chd1P40201 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chd1P40201 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Chd1P40201 Gm44907-201ENSMUST00000207423 1633 ntBASIC16.52■□□□□ 0.24
Chd1P40201 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Gm37264-201ENSMUST00000194916 2192 ntBASIC16.52■□□□□ 0.24
Chd1P40201 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Chd1P40201 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Chd1P40201 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.52■□□□□ 0.24
Chd1P40201 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chd1P40201 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC16.52■□□□□ 0.24
Chd1P40201 Gm4430-202ENSMUST00000193902 1041 ntBASIC16.52■□□□□ 0.24
Chd1P40201 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chd1P40201 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC16.52■□□□□ 0.24
Chd1P40201 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chd1P40201 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chd1P40201 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd1P40201 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd1P40201 Gm7190-201ENSMUST00000118669 1452 ntBASIC16.52■□□□□ 0.23
Chd1P40201 Gm38348-201ENSMUST00000191718 2273 ntBASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms