Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rom1P32958 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Gm23061-201ENSMUST00000102348 116 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Gm11531-201ENSMUST00000117614 555 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Gm11930-201ENSMUST00000117788 190 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Gm4986-201ENSMUST00000119731 549 ntBASIC8.91□□□□□ -0.98
Rom1P32958 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC8.91□□□□□ -0.98
Rom1P32958 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Gm27441-201ENSMUST00000185000 105 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Gm42629-201ENSMUST00000199063 1102 ntBASIC8.91□□□□□ -0.98
Rom1P32958 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Rom1P32958 Gm43962-201ENSMUST00000203898 190 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Gm45059-201ENSMUST00000205558 1077 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Rom1P32958 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rom1P32958 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rom1P32958 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.91□□□□□ -0.98
Rom1P32958 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC8.91□□□□□ -0.98
Rom1P32958 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 AC108416.1-201ENSMUST00000228755 1558 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rom1P32958 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Rom1P32958 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
Rom1P32958 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC8.9□□□□□ -0.98
Rom1P32958 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Gm12329-201ENSMUST00000120829 1007 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Gm11658-201ENSMUST00000120913 1008 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Gm7150-201ENSMUST00000122032 981 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Gm12138-201ENSMUST00000122180 951 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Gm5342-201ENSMUST00000181982 1003 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Gm26956-201ENSMUST00000182176 986 ntBASIC8.9□□□□□ -0.98
Rom1P32958 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC8.9□□□□□ -0.98
Rom1P32958 Ighv4-2-201ENSMUST00000192975 362 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Gm9353-201ENSMUST00000200472 604 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 AC122891.1-201ENSMUST00000218671 268 ntBASIC8.9□□□□□ -0.98
Rom1P32958 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rom1P32958 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rom1P32958 Gm37333-201ENSMUST00000192904 2251 ntBASIC8.9□□□□□ -0.98
Rom1P32958 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Rom1P32958 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rom1P32958 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms