Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.94□□□□□ -0.34
Vcam1P29533 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vcam1P29533 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vcam1P29533 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Vcam1P29533 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Vcam1P29533 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.94□□□□□ -0.34
Vcam1P29533 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.94□□□□□ -0.34
Vcam1P29533 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.94□□□□□ -0.34
Vcam1P29533 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vcam1P29533 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Vcam1P29533 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm13047-201ENSMUST00000117116 815 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm13039-201ENSMUST00000118638 794 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm23647-201ENSMUST00000175042 109 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Rn5s-201ENSMUST00000177555 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm22109-201ENSMUST00000177995 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm22291-201ENSMUST00000178027 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm23284-201ENSMUST00000178069 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm25018-201ENSMUST00000179081 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm25212-201ENSMUST00000179432 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm26391-201ENSMUST00000179843 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm18801-201ENSMUST00000186616 536 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm19918-201ENSMUST00000194858 400 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Vcam1P29533 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Vcam1P29533 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm24089-201ENSMUST00000093696 109 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms