Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.09□□□□□ -0.79
P06344 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
P06344 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.09□□□□□ -0.79
P06344 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.09□□□□□ -0.79
P06344 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
P06344 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P06344 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P06344 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P06344 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P06344 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
P06344 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
P06344 Gm15374-201ENSMUST00000119313 844 ntBASIC10.08□□□□□ -0.8
P06344 Gm14395-201ENSMUST00000120494 563 ntBASIC10.08□□□□□ -0.8
P06344 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P06344 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
P06344 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
P06344 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Gm23694-201ENSMUST00000179335 110 ntBASIC10.08□□□□□ -0.8
P06344 Gm27438-201ENSMUST00000183480 110 ntBASIC10.08□□□□□ -0.8
P06344 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.08□□□□□ -0.8
P06344 Gm37826-201ENSMUST00000195329 322 ntBASIC10.08□□□□□ -0.8
P06344 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Gm45856-201ENSMUST00000212752 416 ntBASIC10.08□□□□□ -0.8
P06344 Gm5468-202ENSMUST00000227851 682 ntBASIC10.08□□□□□ -0.8
P06344 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
P06344 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
P06344 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
P06344 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.08□□□□□ -0.8
P06344 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.08□□□□□ -0.8
P06344 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.08□□□□□ -0.8
P06344 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.08□□□□□ -0.8
P06344 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.08□□□□□ -0.8
P06344 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P06344 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06344 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.07□□□□□ -0.8
P06344 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
P06344 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.07□□□□□ -0.8
P06344 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
P06344 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P06344 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.07□□□□□ -0.8
P06344 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P06344 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P06344 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
P06344 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P06344 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P06344 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P06344 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P06344 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.07□□□□□ -0.8
P06344 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms