Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Polr1aO35134 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC17.09■□□□□ 0.33
Polr1aO35134 Gm6425-201ENSMUST00000136332 790 ntBASIC17.09■□□□□ 0.33
Polr1aO35134 Gm42803-201ENSMUST00000201051 451 ntBASIC17.09■□□□□ 0.33
Polr1aO35134 Gm45527-201ENSMUST00000211052 774 ntBASIC17.09■□□□□ 0.33
Polr1aO35134 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Polr1aO35134 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Polr1aO35134 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Gm43727-201ENSMUST00000198021 2647 ntBASIC17.09■□□□□ 0.33
Polr1aO35134 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Polr1aO35134 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Polr1aO35134 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Polr1aO35134 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Polr1aO35134 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Polr1aO35134 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC17.08■□□□□ 0.33
Polr1aO35134 Gm42833-201ENSMUST00000196019 2124 ntBASIC17.08■□□□□ 0.33
Polr1aO35134 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC17.08■□□□□ 0.33
Polr1aO35134 Gm13608-201ENSMUST00000121807 1406 ntBASIC17.08■□□□□ 0.33
Polr1aO35134 Gm8876-201ENSMUST00000120768 1122 ntBASIC17.08■□□□□ 0.32
Polr1aO35134 Gm26174-201ENSMUST00000158415 219 ntBASIC17.08■□□□□ 0.32
Polr1aO35134 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Polr1aO35134 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC17.08■□□□□ 0.32
Polr1aO35134 Gm43726-201ENSMUST00000199110 775 ntBASIC17.08■□□□□ 0.32
Polr1aO35134 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Polr1aO35134 Gm8796-201ENSMUST00000219122 936 ntBASIC17.08■□□□□ 0.32
Polr1aO35134 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Polr1aO35134 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Polr1aO35134 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Polr1aO35134 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.08■□□□□ 0.32
Polr1aO35134 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Polr1aO35134 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Polr1aO35134 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC17.08■□□□□ 0.32
Polr1aO35134 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Polr1aO35134 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Polr1aO35134 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Polr1aO35134 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Mir744-201ENSMUST00000103261 100 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Gm13326-201ENSMUST00000118730 1011 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Gm14006-201ENSMUST00000122132 981 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 AC133496.1-201ENSMUST00000223891 743 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC17.07■□□□□ 0.32
Polr1aO35134 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Polr1aO35134 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Gm13700-201ENSMUST00000118624 1128 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Gm14148-201ENSMUST00000122433 1008 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Polr1aO35134 Gm4943-201ENSMUST00000132879 424 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Polr1aO35134 Gm37851-201ENSMUST00000193871 889 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 AC124613.1-201ENSMUST00000198711 88 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Gm5040-201ENSMUST00000218609 800 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 AC107711.4-201ENSMUST00000228948 440 ntBASIC17.07■□□□□ 0.32
Polr1aO35134 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Polr1aO35134 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Polr1aO35134 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC17.06■□□□□ 0.32
Polr1aO35134 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms