Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Gm29067-201ENSMUST00000190821 470 ntBASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Gm35960-201ENSMUST00000202712 767 ntBASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Gm16380-201ENSMUST00000077997 478 ntBASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srp54bE9PXC0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm25148-201ENSMUST00000104611 123 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm13600-201ENSMUST00000117949 744 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm15197-201ENSMUST00000120526 478 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm18968-201ENSMUST00000221319 862 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.18□□□□□ -0.62
Srp54bE9PXC0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Srp54bE9PXC0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.17□□□□□ -0.62
Srp54bE9PXC0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Srp54bE9PXC0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Srp54bE9PXC0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Srp54bE9PXC0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms