Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm18473-201ENSMUST00000220543 868 ntBASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm38005-201ENSMUST00000194845 2745 ntBASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm37608-201ENSMUST00000195696 1880 ntBASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm1840-201ENSMUST00000051687 1432 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm44510-201ENSMUST00000206288 4532 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm7742-201ENSMUST00000167648 1527 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm7732-201ENSMUST00000170486 1527 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm7740-201ENSMUST00000186171 1527 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm7736-201ENSMUST00000096981 1527 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm16479-201ENSMUST00000121706 932 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm18307-201ENSMUST00000206864 949 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm19220-201ENSMUST00000222682 803 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm8399-201ENSMUST00000082300 1117 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm37131-201ENSMUST00000192502 1561 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm5159-201ENSMUST00000212733 1652 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm6831-202ENSMUST00000213025 1673 ntBASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smco4Q9JIS3 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.96□□□□□ -0.97
Smco4Q9JIS3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 AC117648.1-201ENSMUST00000219777 2510 ntBASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco4Q9JIS3 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC8.96□□□□□ -0.97
Smco4Q9JIS3 Gm8131-201ENSMUST00000213783 1570 ntBASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms