Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm18187-201ENSMUST00000196476 984 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm43818-201ENSMUST00000200605 466 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.36□□□□□ -0.59
Sf3a3Q9D554 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sf3a3Q9D554 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Gm12463-201ENSMUST00000118271 849 ntBASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Gm19287-201ENSMUST00000203190 358 ntBASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Gm5035-201ENSMUST00000215581 927 ntBASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms