Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chaf1bQ9D0N7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm26286-201ENSMUST00000104166 134 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Snora78-201ENSMUST00000158630 128 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm27572-201ENSMUST00000183702 255 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Mir8093-201ENSMUST00000185043 137 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chaf1bQ9D0N7 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm13829-201ENSMUST00000119600 138 ntBASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm38117-201ENSMUST00000194653 939 ntBASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms