Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm14071-201ENSMUST00000117817 509 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm12516-201ENSMUST00000120819 385 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Mir7076-201ENSMUST00000183519 74 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm8285-201ENSMUST00000208293 759 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Snora73b-201ENSMUST00000083419 205 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ssbp3Q9D032 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm23272-201ENSMUST00000104053 129 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm12419-201ENSMUST00000116649 636 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm11451-201ENSMUST00000118946 630 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm17877-201ENSMUST00000192578 814 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm8365-201ENSMUST00000197334 648 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm44551-201ENSMUST00000208804 171 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Gm2875-201ENSMUST00000211333 360 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.47□□□□□ -0.89
Ssbp3Q9D032 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ssbp3Q9D032 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms