Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.71□□□□□ -0.37
Smc1aQ9CU62 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Gm9797-202ENSMUST00000218003 294 ntBASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Gm5705-201ENSMUST00000066241 711 ntBASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smc1aQ9CU62 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.71□□□□□ -0.38
Smc1aQ9CU62 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Gm12795-201ENSMUST00000117594 539 ntBASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Gm13263-201ENSMUST00000121271 838 ntBASIC12.7□□□□□ -0.38
Smc1aQ9CU62 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.7□□□□□ -0.38
Smc1aQ9CU62 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smc1aQ9CU62 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm11956-201ENSMUST00000119525 512 ntBASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm14585-201ENSMUST00000120713 634 ntBASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm7666-201ENSMUST00000146631 819 ntBASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Gm2517-201ENSMUST00000215651 348 ntBASIC12.69□□□□□ -0.38
Smc1aQ9CU62 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.69□□□□□ -0.38
Smc1aQ9CU62 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smc1aQ9CU62 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms