Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.33□□□□□ -0.76
Lims1Q99JW4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Gm37986-201ENSMUST00000193285 383 ntBASIC10.33□□□□□ -0.76
Lims1Q99JW4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lims1Q99JW4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.33□□□□□ -0.76
Lims1Q99JW4 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm18734-201ENSMUST00000172937 808 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm6108-201ENSMUST00000208365 367 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lims1Q99JW4 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.32□□□□□ -0.76
Lims1Q99JW4 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm12579-201ENSMUST00000118040 783 ntBASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm14130-201ENSMUST00000118417 987 ntBASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm12196-201ENSMUST00000120954 262 ntBASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm2965-201ENSMUST00000198365 343 ntBASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Gm6991-201ENSMUST00000218475 1178 ntBASIC10.31□□□□□ -0.76
Lims1Q99JW4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lims1Q99JW4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms