Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.19□□□□□ -0.62
Ccdc28bQ8CEG5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gm3096-201ENSMUST00000185770 364 ntBASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gm38002-201ENSMUST00000193255 180 ntBASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Rps4l-202ENSMUST00000204242 789 ntBASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc28bQ8CEG5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc28bQ8CEG5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms