Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm13351-201ENSMUST00000118087 414 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm13284-201ENSMUST00000121020 547 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm16030-201ENSMUST00000159098 603 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm9353-201ENSMUST00000200472 604 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm25053-201ENSMUST00000103982 133 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm25922-201ENSMUST00000104281 130 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm22846-201ENSMUST00000157706 270 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm24679-201ENSMUST00000158762 111 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm8723-201ENSMUST00000166076 820 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm8701-201ENSMUST00000169259 874 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm19246-201ENSMUST00000173599 255 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm18776-201ENSMUST00000188833 654 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm9369-201ENSMUST00000196009 733 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm25053-202ENSMUST00000199731 132 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh3rf2Q8BZT2 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms