Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm8731-201ENSMUST00000118088 412 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm15566-201ENSMUST00000121130 590 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm5523-201ENSMUST00000180415 997 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm5982-201ENSMUST00000196234 512 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm45113-201ENSMUST00000207518 165 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Gm22334-201ENSMUST00000158070 133 ntBASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Gm7940-201ENSMUST00000218195 769 ntBASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cpsf4Q8BQZ5 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cpsf4Q8BQZ5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms