Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm23085-201ENSMUST00000157849 293 ntBASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm8100-201ENSMUST00000182906 988 ntBASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm15808-201ENSMUST00000119046 604 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm12501-201ENSMUST00000119163 529 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm14208-201ENSMUST00000119645 678 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm12266-201ENSMUST00000120311 962 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm17040-202ENSMUST00000170597 889 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm2260-201ENSMUST00000184965 657 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Mir6420-201ENSMUST00000185032 102 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms