Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krr1Q8BGA5 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.76□□□□□ -0.69
Krr1Q8BGA5 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm26361-201ENSMUST00000158868 186 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm25890-201ENSMUST00000177643 165 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm22614-201ENSMUST00000178300 165 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm27627-201ENSMUST00000183644 150 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm17827-201ENSMUST00000211825 742 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm2553-201ENSMUST00000215986 605 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm22042-201ENSMUST00000082989 165 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm26110-201ENSMUST00000083971 165 ntBASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krr1Q8BGA5 Rims2-204ENSMUST00000226410 3685 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm13350-201ENSMUST00000120519 479 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm17376-201ENSMUST00000166016 84 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm7584-201ENSMUST00000175829 940 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm4157-201ENSMUST00000211647 679 ntBASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krr1Q8BGA5 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms