Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm14219-201ENSMUST00000120414 288 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm9135-201ENSMUST00000182963 990 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm5599-201ENSMUST00000209602 788 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ubfd1Q78JW9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm30946-201ENSMUST00000198288 724 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm9353-201ENSMUST00000200472 604 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm5805-201ENSMUST00000072779 456 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm10020-201ENSMUST00000081993 612 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.04□□□□□ -0.64
Ubfd1Q78JW9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ubfd1Q78JW9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms