Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm23595-201ENSMUST00000104306 130 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm26313-201ENSMUST00000157770 308 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm24312-201ENSMUST00000178677 119 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm7985-201ENSMUST00000183329 981 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gm6612-201ENSMUST00000170777 395 ntBASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gm18001-201ENSMUST00000212023 688 ntBASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ddx55Q6ZPL9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Snord17-201ENSMUST00000104526 238 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm8019-201ENSMUST00000119317 587 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm24078-201ENSMUST00000158184 103 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm7572-201ENSMUST00000182616 766 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Mir6387-201ENSMUST00000184042 108 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gm37723-201ENSMUST00000194480 565 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms